Funny that I’ve seen the same script domain name but different .js file in two of my sites and I’m more than certain it relates to FTP hacking.
One site that was affected was a live site and files were changed on 25/8 at 1:40am. The other site was my own at home and that was hit on the 24/8 9:30pm. I’ve seen logs from the FTP program with access to .js files and the like. I can’t get a hold of logs for the live site (webhosters are being more than awkward).
I use Filezilla and noticed it’s XML file stores password as plain text (grrr) and I wish that sites in the address book with blank emails would prompt for a password as opposed to trying a blank password when logging in.
I’ve ran all manner of spyware cleaners:
Malware Bytes
Spyware Antispyware
Combofix
and I’m hoping what ever has been causing it is gone. Good luck finding the root cause. Best action to begin with is to change the FTP passwords if possible.
Edit: there is a discussion on plain text storage of password over at filezilla:
http://forum.filezilla-project.org/viewtopic.php?f=1&t=16155